Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP20O60882 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.3■■□□□ 1
MMP20O60882 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP20O60882 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
MMP20O60882 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.3■■□□□ 1
MMP20O60882 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP20O60882 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP20O60882 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.3■■□□□ 1
MMP20O60882 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.3■■□□□ 1
MMP20O60882 AC080038.1-201ENST00000611274 1154 ntBASIC21.3■■□□□ 1
MMP20O60882 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.3■■□□□ 1
MMP20O60882 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP20O60882 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP20O60882 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MMP20O60882 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.29■■□□□ 1
MMP20O60882 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP20O60882 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MMP20O60882 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.29■■□□□ 1
MMP20O60882 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP20O60882 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.29■■□□□ 1
MMP20O60882 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
MMP20O60882 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP20O60882 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.29■■□□□ 1
MMP20O60882 AP001160.3-201ENST00000601484 763 ntBASIC21.29■■□□□ 1
MMP20O60882 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.29■■□□□ 1
MMP20O60882 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP20O60882 AC092053.2-201ENST00000640557 1818 ntBASIC21.29■■□□□ 1
MMP20O60882 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.28■■□□□ 1
MMP20O60882 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP20O60882 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
MMP20O60882 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
MMP20O60882 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP20O60882 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.28■■□□□ 1
MMP20O60882 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MMP20O60882 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.28■■□□□ 1
MMP20O60882 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP20O60882 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP20O60882 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP20O60882 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP20O60882 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP20O60882 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.27■■□□□ 1
MMP20O60882 BID-214ENST00000617586 542 ntTSL 5 BASIC21.27■■□□□ 1
MMP20O60882 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
MMP20O60882 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MMP20O60882 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP20O60882 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
MMP20O60882 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP20O60882 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP20O60882 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP20O60882 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP20O60882 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP20O60882 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.26■□□□□ 0.99
MMP20O60882 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP20O60882 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP20O60882 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP20O60882 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP20O60882 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.25■□□□□ 0.99
MMP20O60882 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.25■□□□□ 0.99
MMP20O60882 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.25■□□□□ 0.99
MMP20O60882 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.25■□□□□ 0.99
MMP20O60882 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP20O60882 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
MMP20O60882 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
MMP20O60882 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.25■□□□□ 0.99
MMP20O60882 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP20O60882 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.24■□□□□ 0.99
MMP20O60882 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.24■□□□□ 0.99
MMP20O60882 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP20O60882 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP20O60882 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP20O60882 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP20O60882 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP20O60882 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.24■□□□□ 0.99
MMP20O60882 KRT18P11-201ENST00000435214 1283 ntBASIC21.24■□□□□ 0.99
MMP20O60882 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP20O60882 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms