Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF4O60810 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF4O60810 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF4O60810 Z98882.1-201ENST00000622160 2253 ntBASIC20.58■□□□□ 0.89
PRAMEF4O60810 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.58■□□□□ 0.89
PRAMEF4O60810 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEF4O60810 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF4O60810 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PRAMEF4O60810 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF4O60810 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.58■□□□□ 0.89
PRAMEF4O60810 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEF4O60810 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.58■□□□□ 0.89
PRAMEF4O60810 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEF4O60810 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF4O60810 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.58■□□□□ 0.88
PRAMEF4O60810 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.57■□□□□ 0.88
PRAMEF4O60810 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
PRAMEF4O60810 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF4O60810 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.57■□□□□ 0.88
PRAMEF4O60810 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF4O60810 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PRAMEF4O60810 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF4O60810 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF4O60810 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF4O60810 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF4O60810 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRAMEF4O60810 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF4O60810 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEF4O60810 AC055733.4-201ENST00000638462 1354 ntBASIC20.56■□□□□ 0.88
PRAMEF4O60810 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF4O60810 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF4O60810 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF4O60810 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF4O60810 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.55■□□□□ 0.88
PRAMEF4O60810 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF4O60810 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF4O60810 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF4O60810 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.54■□□□□ 0.88
PRAMEF4O60810 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 AC012414.1-201ENST00000556676 535 ntBASIC20.54■□□□□ 0.88
PRAMEF4O60810 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF4O60810 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
PRAMEF4O60810 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF4O60810 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF4O60810 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 BX005040.4-201ENST00000637145 1518 ntBASIC20.53■□□□□ 0.88
PRAMEF4O60810 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF4O60810 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF4O60810 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms