Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZIC3O60481 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.28■□□□□ 0.68
ZIC3O60481 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
ZIC3O60481 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZIC3O60481 AC003102.1-202ENST00000563394 1796 ntBASIC19.27■□□□□ 0.68
ZIC3O60481 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZIC3O60481 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.27■□□□□ 0.68
ZIC3O60481 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZIC3O60481 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZIC3O60481 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ZIC3O60481 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZIC3O60481 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.27■□□□□ 0.68
ZIC3O60481 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.27■□□□□ 0.68
ZIC3O60481 KRT19P1-201ENST00000405746 1186 ntBASIC19.27■□□□□ 0.68
ZIC3O60481 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ZIC3O60481 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.27■□□□□ 0.68
ZIC3O60481 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.27■□□□□ 0.68
ZIC3O60481 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.27■□□□□ 0.68
ZIC3O60481 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.27■□□□□ 0.68
ZIC3O60481 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZIC3O60481 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.27■□□□□ 0.68
ZIC3O60481 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.27■□□□□ 0.67
ZIC3O60481 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZIC3O60481 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZIC3O60481 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.26■□□□□ 0.67
ZIC3O60481 AC104187.1-201ENST00000607510 612 ntBASIC19.26■□□□□ 0.67
ZIC3O60481 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZIC3O60481 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZIC3O60481 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ZIC3O60481 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.25■□□□□ 0.67
ZIC3O60481 EEF1DP3-203ENST00000566025 782 ntBASIC19.25■□□□□ 0.67
ZIC3O60481 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 IKBKGP1-201ENST00000612193 1073 ntBASIC19.25■□□□□ 0.67
ZIC3O60481 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZIC3O60481 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZIC3O60481 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZIC3O60481 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.24■□□□□ 0.67
ZIC3O60481 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.24■□□□□ 0.67
ZIC3O60481 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.24■□□□□ 0.67
ZIC3O60481 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZIC3O60481 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.23■□□□□ 0.67
ZIC3O60481 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.23■□□□□ 0.67
ZIC3O60481 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.23■□□□□ 0.67
ZIC3O60481 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.23■□□□□ 0.67
ZIC3O60481 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.23■□□□□ 0.67
ZIC3O60481 AC053503.5-201ENST00000601508 636 ntBASIC19.23■□□□□ 0.67
ZIC3O60481 AC092437.1-201ENST00000624794 1048 ntBASIC19.23■□□□□ 0.67
ZIC3O60481 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZIC3O60481 AC010542.4-201ENST00000563151 1910 ntBASIC19.23■□□□□ 0.67
ZIC3O60481 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZIC3O60481 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms