Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSNA1O43805 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.16■□□□□ 0.5
SSNA1O43805 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.16■□□□□ 0.5
SSNA1O43805 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSNA1O43805 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSNA1O43805 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSNA1O43805 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSNA1O43805 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSNA1O43805 AL020996.1-203ENST00000536896 2307 ntBASIC18.16■□□□□ 0.5
SSNA1O43805 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSNA1O43805 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.15■□□□□ 0.5
SSNA1O43805 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SSNA1O43805 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.15■□□□□ 0.5
SSNA1O43805 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.15■□□□□ 0.5
SSNA1O43805 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 PCDHAC2-203ENST00000615316 3011 ntBASIC18.15■□□□□ 0.5
SSNA1O43805 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
SSNA1O43805 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.15■□□□□ 0.5
SSNA1O43805 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSNA1O43805 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSNA1O43805 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSNA1O43805 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.14■□□□□ 0.49
SSNA1O43805 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SSNA1O43805 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSNA1O43805 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SSNA1O43805 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.14■□□□□ 0.49
SSNA1O43805 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.14■□□□□ 0.49
SSNA1O43805 AFG3L1P-217ENST00000557444 2447 ntBASIC18.14■□□□□ 0.49
SSNA1O43805 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSNA1O43805 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSNA1O43805 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SSNA1O43805 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SSNA1O43805 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSNA1O43805 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SSNA1O43805 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSNA1O43805 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SSNA1O43805 AC092296.2-201ENST00000589470 999 ntBASIC18.13■□□□□ 0.49
SSNA1O43805 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.13■□□□□ 0.49
SSNA1O43805 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.13■□□□□ 0.49
SSNA1O43805 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSNA1O43805 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSNA1O43805 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSNA1O43805 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.13■□□□□ 0.49
SSNA1O43805 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSNA1O43805 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 AC026202.3-201ENST00000600805 1127 ntBASIC18.12■□□□□ 0.49
SSNA1O43805 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SSNA1O43805 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.12■□□□□ 0.49
SSNA1O43805 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSNA1O43805 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.12■□□□□ 0.49
SSNA1O43805 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SSNA1O43805 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SSNA1O43805 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
SSNA1O43805 AC090340.1-201ENST00000620778 4980 ntBASIC18.11■□□□□ 0.49
SSNA1O43805 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.11■□□□□ 0.49
SSNA1O43805 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SSNA1O43805 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.11■□□□□ 0.49
SSNA1O43805 RAP2CP1-202ENST00000605179 643 ntBASIC18.11■□□□□ 0.49
SSNA1O43805 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SSNA1O43805 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSNA1O43805 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.11■□□□□ 0.49
SSNA1O43805 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.11■□□□□ 0.49
SSNA1O43805 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.11■□□□□ 0.49
SSNA1O43805 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms