Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
FOXN1O15353 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
FOXN1O15353 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
FOXN1O15353 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.68
FOXN1O15353 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.57■■□□□ 1.68
FOXN1O15353 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.57■■□□□ 1.68
FOXN1O15353 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.57■■□□□ 1.68
FOXN1O15353 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.57■■□□□ 1.68
FOXN1O15353 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
FOXN1O15353 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.57■■□□□ 1.68
FOXN1O15353 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.57■■□□□ 1.68
FOXN1O15353 MYCNOS-205ENST00000641950 531 ntBASIC25.57■■□□□ 1.68
FOXN1O15353 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
FOXN1O15353 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FOXN1O15353 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
FOXN1O15353 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
FOXN1O15353 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
FOXN1O15353 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.56■■□□□ 1.68
FOXN1O15353 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
FOXN1O15353 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.56■■□□□ 1.68
FOXN1O15353 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.56■■□□□ 1.68
FOXN1O15353 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
FOXN1O15353 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
FOXN1O15353 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.56■■□□□ 1.68
FOXN1O15353 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
FOXN1O15353 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.55■■□□□ 1.68
FOXN1O15353 ALDH1A3-203ENST00000557963 1670 ntBASIC25.55■■□□□ 1.68
FOXN1O15353 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
FOXN1O15353 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
FOXN1O15353 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
FOXN1O15353 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
FOXN1O15353 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.55■■□□□ 1.68
FOXN1O15353 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
FOXN1O15353 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
FOXN1O15353 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.55■■□□□ 1.68
FOXN1O15353 MIR4497-201ENST00000583208 89 ntBASIC25.55■■□□□ 1.68
FOXN1O15353 AC083880.1-201ENST00000608266 535 ntBASIC25.55■■□□□ 1.68
FOXN1O15353 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
FOXN1O15353 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.54■■□□□ 1.68
FOXN1O15353 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.54■■□□□ 1.68
FOXN1O15353 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
FOXN1O15353 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
FOXN1O15353 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.54■■□□□ 1.68
FOXN1O15353 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.54■■□□□ 1.68
FOXN1O15353 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.54■■□□□ 1.68
FOXN1O15353 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FOXN1O15353 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
FOXN1O15353 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.54■■□□□ 1.68
FOXN1O15353 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
FOXN1O15353 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
FOXN1O15353 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
FOXN1O15353 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.53■■□□□ 1.68
FOXN1O15353 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
FOXN1O15353 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
FOXN1O15353 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
FOXN1O15353 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
FOXN1O15353 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
FOXN1O15353 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
FOXN1O15353 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.52■■□□□ 1.68
FOXN1O15353 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
FOXN1O15353 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.52■■□□□ 1.68
FOXN1O15353 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.52■■□□□ 1.68
FOXN1O15353 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.52■■□□□ 1.68
FOXN1O15353 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.52■■□□□ 1.68
FOXN1O15353 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.52■■□□□ 1.68
FOXN1O15353 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
FOXN1O15353 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
FOXN1O15353 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.52■■□□□ 1.68
FOXN1O15353 MKRN4P-201ENST00000444706 1521 ntBASIC25.52■■□□□ 1.68
FOXN1O15353 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
FOXN1O15353 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXN1O15353 AC092068.2-201ENST00000590491 1708 ntBASIC25.51■■□□□ 1.68
FOXN1O15353 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
FOXN1O15353 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
FOXN1O15353 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms