Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MID1O15344 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MID1O15344 NCF1B-203ENST00000435988 1254 ntBASIC21.43■■□□□ 1.02
MID1O15344 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.43■■□□□ 1.02
MID1O15344 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.43■■□□□ 1.02
MID1O15344 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.43■■□□□ 1.02
MID1O15344 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.43■■□□□ 1.02
MID1O15344 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MID1O15344 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
MID1O15344 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MID1O15344 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MID1O15344 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
MID1O15344 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.42■■□□□ 1.02
MID1O15344 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.42■■□□□ 1.02
MID1O15344 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.42■■□□□ 1.02
MID1O15344 AL109923.1-201ENST00000618799 583 ntBASIC21.42■■□□□ 1.02
MID1O15344 AC231657.2-201ENST00000624556 255 ntBASIC21.42■■□□□ 1.02
MID1O15344 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MID1O15344 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.41■■□□□ 1.02
MID1O15344 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.41■■□□□ 1.02
MID1O15344 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.41■■□□□ 1.02
MID1O15344 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 AC007322.1-201ENST00000426983 750 ntBASIC21.41■■□□□ 1.02
MID1O15344 KRT18P20-201ENST00000548986 1279 ntBASIC21.41■■□□□ 1.02
MID1O15344 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.41■■□□□ 1.02
MID1O15344 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
MID1O15344 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.41■■□□□ 1.02
MID1O15344 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
MID1O15344 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MID1O15344 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 C9orf163-202ENST00000624034 2573 ntBASIC21.4■■□□□ 1.02
MID1O15344 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.4■■□□□ 1.02
MID1O15344 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.4■■□□□ 1.02
MID1O15344 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.4■■□□□ 1.02
MID1O15344 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.4■■□□□ 1.02
MID1O15344 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
MID1O15344 AC053503.5-201ENST00000601508 636 ntBASIC21.4■■□□□ 1.02
MID1O15344 AL050303.2-201ENST00000619798 666 ntBASIC21.4■■□□□ 1.02
MID1O15344 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.4■■□□□ 1.02
MID1O15344 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MID1O15344 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
MID1O15344 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MID1O15344 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MID1O15344 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MID1O15344 AL355802.2-201ENST00000402069 882 ntBASIC21.39■■□□□ 1.01
MID1O15344 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.39■■□□□ 1.01
MID1O15344 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.39■■□□□ 1.01
MID1O15344 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.01
MID1O15344 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MID1O15344 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MID1O15344 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MID1O15344 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MID1O15344 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MID1O15344 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.38■■□□□ 1.01
MID1O15344 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MID1O15344 GPX1P1-201ENST00000388829 606 ntBASIC21.38■■□□□ 1.01
MID1O15344 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.38■■□□□ 1.01
MID1O15344 AC005181.1-201ENST00000604782 1256 ntBASIC21.38■■□□□ 1.01
MID1O15344 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MID1O15344 C1orf229-201ENST00000623686 2258 ntBASIC21.38■■□□□ 1.01
MID1O15344 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.37■■□□□ 1.01
MID1O15344 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.37■■□□□ 1.01
MID1O15344 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
MID1O15344 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.37■■□□□ 1.01
MID1O15344 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 SLC7A5P2-201ENST00000553010 536 ntBASIC21.37■■□□□ 1.01
MID1O15344 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.37■■□□□ 1.01
MID1O15344 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 AC010536.3-201ENST00000620306 533 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms