Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.29■□□□□ 0.68
SMAD9O15198 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 AC027612.3-201ENST00000413684 1047 ntBASIC19.29■□□□□ 0.68
SMAD9O15198 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD9O15198 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.29■□□□□ 0.68
SMAD9O15198 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD9O15198 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.29■□□□□ 0.68
SMAD9O15198 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.28■□□□□ 0.68
SMAD9O15198 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD9O15198 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMAD9O15198 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.28■□□□□ 0.68
SMAD9O15198 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.28■□□□□ 0.68
SMAD9O15198 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMAD9O15198 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMAD9O15198 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD9O15198 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD9O15198 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.28■□□□□ 0.68
SMAD9O15198 AC242852.2-201ENST00000615738 1807 ntBASIC19.28■□□□□ 0.68
SMAD9O15198 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD9O15198 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD9O15198 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.27■□□□□ 0.68
SMAD9O15198 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.27■□□□□ 0.68
SMAD9O15198 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD9O15198 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD9O15198 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD9O15198 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.27■□□□□ 0.68
SMAD9O15198 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.27■□□□□ 0.68
SMAD9O15198 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.27■□□□□ 0.68
SMAD9O15198 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD9O15198 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD9O15198 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD9O15198 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SMAD9O15198 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMAD9O15198 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMAD9O15198 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.27■□□□□ 0.67
SMAD9O15198 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMAD9O15198 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.26■□□□□ 0.67
SMAD9O15198 BX005040.4-201ENST00000637145 1518 ntBASIC19.26■□□□□ 0.67
SMAD9O15198 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.26■□□□□ 0.67
SMAD9O15198 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SMAD9O15198 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD9O15198 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.25■□□□□ 0.67
SMAD9O15198 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.25■□□□□ 0.67
SMAD9O15198 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SMAD9O15198 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.25■□□□□ 0.67
SMAD9O15198 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMAD9O15198 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMAD9O15198 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD9O15198 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.24■□□□□ 0.67
SMAD9O15198 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.24■□□□□ 0.67
SMAD9O15198 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.24■□□□□ 0.67
SMAD9O15198 AP004607.7-201ENST00000527152 1677 ntBASIC19.24■□□□□ 0.67
SMAD9O15198 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMAD9O15198 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMAD9O15198 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
SMAD9O15198 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SMAD9O15198 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
SMAD9O15198 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMAD9O15198 YBX1P1-201ENST00000445822 960 ntBASIC19.24■□□□□ 0.67
SMAD9O15198 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.24■□□□□ 0.67
SMAD9O15198 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD9O15198 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms