Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.68■□□□□ 0.74
TO15178 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TO15178 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TO15178 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.68■□□□□ 0.74
TO15178 RARRES2P6-201ENST00000567333 442 ntBASIC19.68■□□□□ 0.74
TO15178 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.68■□□□□ 0.74
TO15178 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TO15178 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
TO15178 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.68■□□□□ 0.74
TO15178 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TO15178 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TO15178 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TO15178 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.68■□□□□ 0.74
TO15178 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TO15178 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TO15178 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.67■□□□□ 0.74
TO15178 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
TO15178 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.67■□□□□ 0.74
TO15178 AC026471.6-201ENST00000622954 1905 ntBASIC19.67■□□□□ 0.74
TO15178 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.67■□□□□ 0.74
TO15178 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.67■□□□□ 0.74
TO15178 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.67■□□□□ 0.74
TO15178 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TO15178 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TO15178 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.66■□□□□ 0.74
TO15178 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 AC003102.1-202ENST00000563394 1796 ntBASIC19.66■□□□□ 0.74
TO15178 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 KRT18P14-201ENST00000534205 1250 ntBASIC19.66■□□□□ 0.74
TO15178 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TO15178 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.66■□□□□ 0.74
TO15178 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.66■□□□□ 0.74
TO15178 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TO15178 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TO15178 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TO15178 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TO15178 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TO15178 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TO15178 AC079140.4-201ENST00000507448 529 ntBASIC19.65■□□□□ 0.74
TO15178 AC087623.3-201ENST00000607047 1098 ntBASIC19.65■□□□□ 0.74
TO15178 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TO15178 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TO15178 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TO15178 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.65■□□□□ 0.74
TO15178 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TO15178 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TO15178 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.65■□□□□ 0.74
TO15178 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TO15178 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TO15178 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TO15178 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TO15178 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TO15178 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TO15178 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TO15178 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TO15178 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TO15178 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.63■□□□□ 0.73
TO15178 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.63■□□□□ 0.73
TO15178 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.63■□□□□ 0.73
TO15178 AC034268.1-201ENST00000441047 882 ntBASIC19.63■□□□□ 0.73
TO15178 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.63■□□□□ 0.73
TO15178 DUX4L2-201ENST00000561772 1275 ntBASIC19.63■□□□□ 0.73
TO15178 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TO15178 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
TO15178 DUX4L6-201ENST00000626483 1275 ntBASIC19.63■□□□□ 0.73
TO15178 DUX4L1-201ENST00000627662 1275 ntBASIC19.63■□□□□ 0.73
TO15178 DUX4L8-201ENST00000629013 1275 ntBASIC19.63■□□□□ 0.73
TO15178 DUX4L3-201ENST00000630187 1275 ntBASIC19.63■□□□□ 0.73
TO15178 DUX4L7-201ENST00000630678 1275 ntBASIC19.63■□□□□ 0.73
TO15178 DUX4L5-201ENST00000630834 1275 ntBASIC19.63■□□□□ 0.73
TO15178 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TO15178 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TO15178 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TO15178 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.62■□□□□ 0.73
TO15178 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.62■□□□□ 0.73
TO15178 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TO15178 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TO15178 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TO15178 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.62■□□□□ 0.73
TO15178 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TO15178 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TO15178 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.62■□□□□ 0.73
TO15178 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TO15178 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.62■□□□□ 0.73
TO15178 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.62■□□□□ 0.73
TO15178 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.62■□□□□ 0.73
TO15178 AC104564.3-201ENST00000582367 638 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms