Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.9■□□□□ 0.94
EIF3FO00303 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 AL121603.2-201ENST00000557373 2117 ntBASIC20.9■□□□□ 0.94
EIF3FO00303 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
EIF3FO00303 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 AC003102.1-202ENST00000563394 1796 ntBASIC20.9■□□□□ 0.94
EIF3FO00303 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3FO00303 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.89■□□□□ 0.94
EIF3FO00303 AC005224.4-201ENST00000583262 1652 ntBASIC20.89■□□□□ 0.94
EIF3FO00303 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
EIF3FO00303 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
EIF3FO00303 AC055733.4-201ENST00000638462 1354 ntBASIC20.89■□□□□ 0.93
EIF3FO00303 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3FO00303 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.89■□□□□ 0.93
EIF3FO00303 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3FO00303 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3FO00303 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3FO00303 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3FO00303 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3FO00303 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.89■□□□□ 0.93
EIF3FO00303 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
EIF3FO00303 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3FO00303 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.88■□□□□ 0.93
EIF3FO00303 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3FO00303 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
EIF3FO00303 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3FO00303 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3FO00303 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.88■□□□□ 0.93
EIF3FO00303 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
EIF3FO00303 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3FO00303 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
EIF3FO00303 SLC25A24-204ENST00000569674 2357 ntBASIC20.87■□□□□ 0.93
EIF3FO00303 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3FO00303 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
EIF3FO00303 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3FO00303 IRS3P-201ENST00000223076 1006 ntBASIC20.87■□□□□ 0.93
EIF3FO00303 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3FO00303 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
EIF3FO00303 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.87■□□□□ 0.93
EIF3FO00303 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3FO00303 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.87■□□□□ 0.93
EIF3FO00303 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
EIF3FO00303 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.87■□□□□ 0.93
EIF3FO00303 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3FO00303 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.86■□□□□ 0.93
EIF3FO00303 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
EIF3FO00303 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
EIF3FO00303 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3FO00303 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3FO00303 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.86■□□□□ 0.93
EIF3FO00303 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3FO00303 AC105265.2-201ENST00000467189 838 ntBASIC20.86■□□□□ 0.93
EIF3FO00303 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.86■□□□□ 0.93
EIF3FO00303 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3FO00303 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.86■□□□□ 0.93
EIF3FO00303 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.86■□□□□ 0.93
EIF3FO00303 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.86■□□□□ 0.93
EIF3FO00303 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3FO00303 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
EIF3FO00303 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
EIF3FO00303 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3FO00303 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3FO00303 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3FO00303 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3FO00303 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.85■□□□□ 0.93
EIF3FO00303 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.85■□□□□ 0.93
EIF3FO00303 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3FO00303 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.85■□□□□ 0.93
EIF3FO00303 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.85■□□□□ 0.93
EIF3FO00303 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.85■□□□□ 0.93
EIF3FO00303 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3FO00303 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.84■□□□□ 0.93
EIF3FO00303 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
EIF3FO00303 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
EIF3FO00303 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.84■□□□□ 0.93
EIF3FO00303 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EIF3FO00303 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms