Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SIRPB1O00241 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.01■□□□□ 0.47
SIRPB1O00241 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIRPB1O00241 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SIRPB1O00241 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.01■□□□□ 0.47
SIRPB1O00241 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIRPB1O00241 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIRPB1O00241 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.01■□□□□ 0.47
SIRPB1O00241 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIRPB1O00241 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SIRPB1O00241 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIRPB1O00241 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIRPB1O00241 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.01■□□□□ 0.47
SIRPB1O00241 AL137060.1-201ENST00000618151 2648 ntBASIC18.01■□□□□ 0.47
SIRPB1O00241 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18■□□□□ 0.47
SIRPB1O00241 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18■□□□□ 0.47
SIRPB1O00241 AP004607.7-201ENST00000527152 1677 ntBASIC18■□□□□ 0.47
SIRPB1O00241 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18■□□□□ 0.47
SIRPB1O00241 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18■□□□□ 0.47
SIRPB1O00241 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
SIRPB1O00241 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SIRPB1O00241 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18■□□□□ 0.47
SIRPB1O00241 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18■□□□□ 0.47
SIRPB1O00241 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SIRPB1O00241 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIRPB1O00241 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18■□□□□ 0.47
SIRPB1O00241 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18■□□□□ 0.47
SIRPB1O00241 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SIRPB1O00241 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SIRPB1O00241 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 AC244015.2-201ENST00000616358 1861 ntBASIC17.99■□□□□ 0.47
SIRPB1O00241 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SIRPB1O00241 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.99■□□□□ 0.47
SIRPB1O00241 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.99■□□□□ 0.47
SIRPB1O00241 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.99■□□□□ 0.47
SIRPB1O00241 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.99■□□□□ 0.47
SIRPB1O00241 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIRPB1O00241 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.98■□□□□ 0.47
SIRPB1O00241 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SIRPB1O00241 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SIRPB1O00241 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.98■□□□□ 0.47
SIRPB1O00241 AL034346.1-201ENST00000568244 1277 ntBASIC17.98■□□□□ 0.47
SIRPB1O00241 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.98■□□□□ 0.47
SIRPB1O00241 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIRPB1O00241 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SIRPB1O00241 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.97■□□□□ 0.47
SIRPB1O00241 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.97■□□□□ 0.47
SIRPB1O00241 AC099791.1-201ENST00000416440 715 ntBASIC17.97■□□□□ 0.47
SIRPB1O00241 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.97■□□□□ 0.47
SIRPB1O00241 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIRPB1O00241 AC026310.3-201ENST00000625186 2373 ntBASIC17.97■□□□□ 0.47
SIRPB1O00241 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SIRPB1O00241 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.97■□□□□ 0.47
SIRPB1O00241 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIRPB1O00241 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIRPB1O00241 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIRPB1O00241 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.96■□□□□ 0.47
SIRPB1O00241 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SIRPB1O00241 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.96■□□□□ 0.47
SIRPB1O00241 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.96■□□□□ 0.47
SIRPB1O00241 AC104564.3-201ENST00000582367 638 ntBASIC17.96■□□□□ 0.47
SIRPB1O00241 AC106739.1-201ENST00000617035 715 ntBASIC17.96■□□□□ 0.47
SIRPB1O00241 AC110285.6-201ENST00000617652 491 ntBASIC17.96■□□□□ 0.47
SIRPB1O00241 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIRPB1O00241 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIRPB1O00241 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SIRPB1O00241 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SIRPB1O00241 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms