Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SMUG1P1-201ENST00000590640 811 ntBASIC21.55■■□□□ 1.04
AP3B1O00203 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
AP3B1O00203 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.55■■□□□ 1.04
AP3B1O00203 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP3B1O00203 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP3B1O00203 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.55■■□□□ 1.04
AP3B1O00203 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.55■■□□□ 1.04
AP3B1O00203 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AP3B1O00203 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
AP3B1O00203 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
AP3B1O00203 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.54■■□□□ 1.04
AP3B1O00203 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.54■■□□□ 1.04
AP3B1O00203 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP3B1O00203 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.54■■□□□ 1.04
AP3B1O00203 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP3B1O00203 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP3B1O00203 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.54■■□□□ 1.04
AP3B1O00203 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP3B1O00203 AC027682.1-201ENST00000562846 899 ntBASIC21.54■■□□□ 1.04
AP3B1O00203 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.54■■□□□ 1.04
AP3B1O00203 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.54■■□□□ 1.04
AP3B1O00203 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP3B1O00203 AP006587.3-201ENST00000525742 1516 ntBASIC21.54■■□□□ 1.04
AP3B1O00203 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AP3B1O00203 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
AP3B1O00203 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
AP3B1O00203 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
AP3B1O00203 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
AP3B1O00203 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 EDA-201ENST00000338901 1233 ntBASIC21.53■■□□□ 1.04
AP3B1O00203 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.53■■□□□ 1.04
AP3B1O00203 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
AP3B1O00203 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.53■■□□□ 1.04
AP3B1O00203 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.53■■□□□ 1.04
AP3B1O00203 AC106739.1-201ENST00000617035 715 ntBASIC21.53■■□□□ 1.04
AP3B1O00203 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.53■■□□□ 1.04
AP3B1O00203 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AP3B1O00203 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
AP3B1O00203 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
AP3B1O00203 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
AP3B1O00203 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
AP3B1O00203 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
AP3B1O00203 PBX2P1-201ENST00000493219 1291 ntBASIC21.52■■□□□ 1.04
AP3B1O00203 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.52■■□□□ 1.04
AP3B1O00203 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
AP3B1O00203 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
AP3B1O00203 AC009237.3-201ENST00000393279 1427 ntBASIC21.52■■□□□ 1.04
AP3B1O00203 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.52■■□□□ 1.03
AP3B1O00203 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
AP3B1O00203 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
AP3B1O00203 AC003102.1-202ENST00000563394 1796 ntBASIC21.51■■□□□ 1.03
AP3B1O00203 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.51■■□□□ 1.03
AP3B1O00203 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.51■■□□□ 1.03
AP3B1O00203 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.51■■□□□ 1.03
AP3B1O00203 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
AP3B1O00203 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP3B1O00203 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.51■■□□□ 1.03
AP3B1O00203 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP3B1O00203 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.51■■□□□ 1.03
AP3B1O00203 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
AP3B1O00203 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
AP3B1O00203 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP3B1O00203 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.51■■□□□ 1.03
AP3B1O00203 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AP3B1O00203 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
AP3B1O00203 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP3B1O00203 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP3B1O00203 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.5■■□□□ 1.03
AP3B1O00203 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.5■■□□□ 1.03
AP3B1O00203 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP3B1O00203 AC096631.2-201ENST00000436136 790 ntBASIC21.5■■□□□ 1.03
AP3B1O00203 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.5■■□□□ 1.03
AP3B1O00203 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.5■■□□□ 1.03
AP3B1O00203 AC008764.7-201ENST00000593779 1081 ntBASIC21.5■■□□□ 1.03
AP3B1O00203 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
AP3B1O00203 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP3B1O00203 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.5■■□□□ 1.03
AP3B1O00203 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
AP3B1O00203 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.5■■□□□ 1.03
AP3B1O00203 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
AP3B1O00203 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.5■■□□□ 1.03
AP3B1O00203 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AP3B1O00203 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
AP3B1O00203 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.49■■□□□ 1.03
AP3B1O00203 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
AP3B1O00203 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms