Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AC073648.6-201ENST00000641589 218 ntBASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM43BA6NCK2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 AC008550.1-201ENST00000511500 884 ntBASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 AC079089.2-201ENST00000531211 1277 ntBASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM43BA6NCK2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 AC004812.2-201ENST00000611079 2094 ntBASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 AC026366.1-201ENST00000488803 879 ntBASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 AC053503.5-201ENST00000601508 636 ntBASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM43BA6NCK2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 AL139125.2-201ENST00000623134 1869 ntBASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 UNC93B5-201ENST00000530315 699 ntBASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TRIM43BA6NCK2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 AC010980.2-201ENST00000587099 1412 ntBASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TRIM43BA6NCK2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.47■■□□□ 1.35
TRIM43BA6NCK2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM43BA6NCK2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.45■■□□□ 1.35
TRIM43BA6NCK2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TRIM43BA6NCK2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM43BA6NCK2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.44■■□□□ 1.34
TRIM43BA6NCK2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms