Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV9S1A1TA0A576 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV9S1A1TA0A576 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TCRBV9S1A1TA0A576 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.48■■□□□ 1.03
TCRBV9S1A1TA0A576 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 AC003102.1-202ENST00000563394 1796 ntBASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TCRBV9S1A1TA0A576 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV9S1A1TA0A576 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.45■■□□□ 1.03
TCRBV9S1A1TA0A576 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 AL034346.1-201ENST00000568244 1277 ntBASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCRBV9S1A1TA0A576 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 SERBP1P1-201ENST00000396021 1160 ntBASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 AP004607.7-201ENST00000527152 1677 ntBASIC21.44■■□□□ 1.02
TCRBV9S1A1TA0A576 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 AL138724.1-201ENST00000606771 1088 ntBASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCRBV9S1A1TA0A576 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TCRBV9S1A1TA0A576 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms