Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 AC104564.3-201ENST00000582367 638 ntBASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.85■■□□□ 1.57
CCDC196A0A1B0GTZ2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 FBXW4P1-201ENST00000426721 2239 ntBASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 AC003102.1-202ENST00000563394 1796 ntBASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.84■■□□□ 1.57
CCDC196A0A1B0GTZ2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.83■■□□□ 1.57
CCDC196A0A1B0GTZ2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CCDC196A0A1B0GTZ2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.83■■□□□ 1.56
CCDC196A0A1B0GTZ2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 AC123595.1-201ENST00000440769 1046 ntBASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CCDC196A0A1B0GTZ2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CCDC196A0A1B0GTZ2 LINC02228-203ENST00000641970 1355 ntBASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 YBX1P1-201ENST00000445822 960 ntBASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CCDC196A0A1B0GTZ2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CCDC196A0A1B0GTZ2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 AC244015.2-201ENST00000616358 1861 ntBASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 AC019069.1-201ENST00000610008 1333 ntBASIC24.78■■□□□ 1.56
CCDC196A0A1B0GTZ2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms