Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 AC092437.1-201ENST00000624794 1048 ntBASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV20A0A0B4J274 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 AC004911.1-201ENST00000416316 871 ntBASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV20A0A0B4J274 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 AL353803.4-201ENST00000565882 1934 ntBASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV20A0A0B4J274 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 TPRG1LP1-201ENST00000598702 760 ntBASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRAV20A0A0B4J274 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 AC004812.2-201ENST00000611079 2094 ntBASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 BX005040.4-201ENST00000637145 1518 ntBASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV20A0A0B4J274 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 AC137767.1-201ENST00000602918 1920 ntBASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAV20A0A0B4J274 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV20A0A0B4J274 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV20A0A0B4J274 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV20A0A0B4J274 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRAV20A0A0B4J274 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms