Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 OR7E47P-201ENST00000546390 1422 ntBASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV5A0A0B4J249 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 AL451085.2-201ENST00000605085 799 ntBASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV5A0A0B4J249 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 LINC01521-201ENST00000504184 1943 ntBASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV5A0A0B4J249 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 AC133637.1-201ENST00000624115 1537 ntBASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 AC239859.2-201ENST00000444165 318 ntBASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 Z92544.1-202ENST00000571933 1220 ntBASIC16.52■□□□□ 0.24
TRAV5A0A0B4J249 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV5A0A0B4J249 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV5A0A0B4J249 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV5A0A0B4J249 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV5A0A0B4J249 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV5A0A0B4J249 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 AL117332.1-201ENST00000622628 974 ntBASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV5A0A0B4J249 LINC01006-201ENST00000333319 2292 ntBASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV5A0A0B4J249 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms