Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ACSL1-204ENST00000504342 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 GALNT17-205ENST00000618959 3012 ntTSL 5 BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.21□□□□□ -0.46
LMO3Q8TAP4 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 ZNF250-202ENST00000417550 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 CPEB1-216ENST00000618449 2459 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 FUT6-201ENST00000286955 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 LINC01597-201ENST00000380888 4472 ntTSL 5 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 KDM4D-202ENST00000536741 2737 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 OR4D2-202ENST00000641866 2011 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 ZP3-202ENST00000394857 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 PPFIA2-227ENST00000552948 3976 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 C14orf159-201ENST00000256324 2967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 NR1H4-201ENST00000188403 1630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 IKZF5-205ENST00000617859 4542 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 FAM86FP-201ENST00000338711 969 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 MIR182-201ENST00000385255 110 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 HNRNPA1P46-201ENST00000411735 937 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 AC092966.1-201ENST00000414895 526 ntTSL 5 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 RPL23P11-201ENST00000418077 411 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 LINC02054-201ENST00000419960 885 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 AL138895.1-201ENST00000448674 173 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 AC093157.1-201ENST00000453011 794 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 RN7SL299P-201ENST00000464573 280 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 NDUFA3-210ENST00000471292 646 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 snoZ6.1-201ENST00000516391 75 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 AC104371.1-201ENST00000522077 797 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 SNHG14-220ENST00000553149 513 ntTSL 5 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 MT3-206ENST00000570176 579 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 RN7SL592P-201ENST00000585082 281 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 AL133396.2-201ENST00000617466 397 ntBASIC12.2□□□□□ -0.46
LMO3Q8TAP4 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 EDAR-203ENST00000409271 4323 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
LMO3Q8TAP4 TRIM36-207ENST00000513154 4218 ntTSL 2 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 RAD9B-204ENST00000409300 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 DDX19A-201ENST00000302243 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 TBP-201ENST00000230354 1861 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AL136115.3-201ENST00000641788 1873 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 PILRA-201ENST00000198536 1316 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 EEF1GP4-201ENST00000467631 1307 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 KCNAB2-203ENST00000352527 4165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 VARS2-213ENST00000625423 3362 ntTSL 2 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 IL18R1-203ENST00000409599 3854 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 FCER1A-202ENST00000368115 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE1-201ENST00000381700 768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE12H-201ENST00000381722 527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 SPTLC1P3-201ENST00000403408 259 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE12D-201ENST00000405679 527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE12C-201ENST00000420398 527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GRTP1-AS1-202ENST00000423246 465 ntTSL 5 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AL512326.3-201ENST00000424885 171 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 KCNK16-203ENST00000425054 1272 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE12F-201ENST00000440137 527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE12G-201ENST00000445148 527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 RN7SL614P-201ENST00000461850 280 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 IGHV7-56-201ENST00000518372 351 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC092368.1-201ENST00000568014 733 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC091132.3-201ENST00000579701 470 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC138645.1-201ENST00000582765 470 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC018371.2-201ENST00000583051 913 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC067969.2-201ENST00000597015 570 ntTSL 4 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE13-201ENST00000612958 530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 GAGE2E-201ENST00000621907 403 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 AC005224.1-201ENST00000458492 1537 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 OCIAD1-205ENST00000444354 1756 ntTSL 3 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC12.19□□□□□ -0.46
LMO3Q8TAP4 OR10N1P-202ENST00000641519 1479 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms