Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SLC1A1P43005 GABRA5-201ENST00000335625 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 CFAP206-202ENST00000369562 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 ACTN3-201ENST00000502692 3084 ntTSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC139493.2-201ENST00000508056 1612 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 ZNF436-202ENST00000374608 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 SGK1-204ENST00000367858 3201 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 NEDD1-202ENST00000411739 2490 ntTSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 PRAMEF7-201ENST00000330881 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 NEFM-203ENST00000437366 3148 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 TNXB-203ENST00000451343 3125 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 LINC00327-201ENST00000443778 2087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 ITGBL1-205ENST00000545560 4808 ntTSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 PPFIA2-211ENST00000548586 4033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 LRRD1-205ENST00000458448 2830 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 ACSL1-204ENST00000504342 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 LINC02289-203ENST00000557526 1817 ntTSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 DNAI2-205ENST00000579490 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 TNFAIP1-201ENST00000226225 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 AC096636.1-201ENST00000625140 3618 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 IMPDH2-201ENST00000326739 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 CHRNB1-202ENST00000536404 1623 ntTSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 MED8-203ENST00000372457 1924 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 DLAT-201ENST00000280346 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SLC1A1P43005 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 FEN1P1-201ENST00000401028 1145 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 ACTG1P18-201ENST00000401561 1143 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 HNRNPA1P58-201ENST00000403629 610 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 AL353747.1-201ENST00000404577 267 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 NTM-IT-201ENST00000421651 373 ntTSL 3 BASIC12.16□□□□□ -0.46
SLC1A1P43005 AC113174.1-201ENST00000433897 105 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 AL118511.2-201ENST00000436739 311 ntTSL 3 BASIC12.16□□□□□ -0.46
SLC1A1P43005 ST3GAL5-AS1-201ENST00000455121 783 ntTSL 3 BASIC12.16□□□□□ -0.46
SLC1A1P43005 HSD3BP2-201ENST00000457615 1118 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 AC011005.1-201ENST00000467614 1263 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
SLC1A1P43005 AC109492.1-201ENST00000503349 602 ntTSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 LINC02106-202ENST00000513880 225 ntTSL 3 BASIC12.16□□□□□ -0.46
SLC1A1P43005 SNORA31.7-201ENST00000516287 135 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.16□□□□□ -0.46
SLC1A1P43005 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC12.16□□□□□ -0.46
SLC1A1P43005 AC007923.3-201ENST00000578645 292 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.16□□□□□ -0.46
SLC1A1P43005 MIR4296-201ENST00000581038 88 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 AC147067.2-201ENST00000608161 289 ntBASIC12.16□□□□□ -0.46
SLC1A1P43005 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 TSN-202ENST00000409193 1436 ntTSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 ZNF648-201ENST00000339948 3649 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 PCDHGC3-201ENST00000308177 4725 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 ZSCAN29-201ENST00000396972 2831 ntTSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 NKIRAS1-205ENST00000421515 2018 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 NFKB1-205ENST00000505458 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 FCRL3-202ENST00000368186 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 DLAT-202ENST00000393051 3517 ntTSL 5 BASIC12.16□□□□□ -0.46
SLC1A1P43005 VPS33A-201ENST00000267199 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 MED24-203ENST00000394127 3456 ntTSL 2 BASIC12.16□□□□□ -0.46
SLC1A1P43005 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SLC1A1P43005 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC12.15□□□□□ -0.46
SLC1A1P43005 AC004584.3-201ENST00000572877 2356 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 COQ6-202ENST00000394026 1608 ntTSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SLC1A1P43005 FKBP9P1-202ENST00000455909 2451 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 C4orf50-201ENST00000324058 5201 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 RFFL-205ENST00000415395 1706 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SLC1A1P43005 BZW2-214ENST00000630952 1721 ntTSL 5 BASIC12.15□□□□□ -0.46
SLC1A1P43005 ADAMTS7P3-201ENST00000566116 3716 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC12.15□□□□□ -0.46
SLC1A1P43005 PHBP3-201ENST00000412562 819 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms