Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 PDXDC1-202ENST00000396410 4521 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 TMCC2-203ENST00000358024 3738 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 TIGD7-201ENST00000396862 3612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 NEFM-203ENST00000437366 3148 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 NT5C1B-RDH14-202ENST00000532967 2142 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 APOL4-202ENST00000332987 1825 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 AC093915.1-201ENST00000605740 1543 ntBASIC12.37□□□□□ -0.43
LMO3Q8TAP4 GSTM5-203ENST00000369813 4370 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 ARR3-205ENST00000620997 1309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO3Q8TAP4 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 LINC00562-201ENST00000566385 2470 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AL390728.2-201ENST00000400933 1670 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 ACTR1A-205ENST00000487599 2726 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 CARMN-209ENST00000602315 2706 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 MPP4-202ENST00000359962 2436 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 SPECC1-204ENST00000395527 3363 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 KY-201ENST00000423778 2345 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC106872.1-201ENST00000512492 1360 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 OR2Y1-201ENST00000307832 1058 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 MIR1226-201ENST00000408658 75 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 MRPS21P6-201ENST00000415184 261 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC004910.1-201ENST00000433493 787 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC005041.2-201ENST00000448783 982 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 RN7SL79P-201ENST00000484117 290 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 RPL18P1-201ENST00000497218 552 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 TMA16-208ENST00000513134 747 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC084082.1-202ENST00000517961 956 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC009630.1-201ENST00000523081 559 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 TRPT1-215ENST00000546089 684 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC005261.3-201ENST00000597973 1045 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC060764.1-201ENST00000603811 454 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AL355353.1-201ENST00000604014 330 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AMBN-201ENST00000322937 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 FAM153B-201ENST00000253490 1913 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 ZSCAN29-201ENST00000396972 2831 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 SH2D4A-201ENST00000265807 3352 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 GPR101-201ENST00000298110 1527 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 POTEH-203ENST00000621704 1874 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO3Q8TAP4 AC106785.2-201ENST00000564385 1319 ntBASIC12.36□□□□□ -0.43
LMO3Q8TAP4 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 NAP1L6-201ENST00000373518 2044 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 CCT4P1-201ENST00000475327 1558 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 OVCH2-203ENST00000612000 1730 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 C17orf99-201ENST00000340363 984 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 RN7SKP170-201ENST00000362550 328 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 NMS-201ENST00000376865 485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 SRSF9P1-201ENST00000399149 530 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 SHANK2-AS2-201ENST00000429268 356 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 ATF4P1-201ENST00000443279 1073 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 HNRNPA3P8-201ENST00000474219 974 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 DNM1P28-201ENST00000565702 474 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 RN7SL451P-201ENST00000583026 299 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 ATF4P2-201ENST00000601944 1073 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 AZU1P1-201ENST00000603479 385 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 OR3A1-202ENST00000615105 966 ntBASIC12.35□□□□□ -0.43
LMO3Q8TAP4 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 AC244230.1-201ENST00000623463 498 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 FAM25BP-203ENST00000624613 404 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 MICAL3-203ENST00000400561 3046 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 BICD1-201ENST00000281474 3281 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 KCNE4-201ENST00000281830 3291 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 UPK1B-201ENST00000264234 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 LINC02080-201ENST00000585863 3085 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO3Q8TAP4 IRF5-201ENST00000249375 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms