Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.02■□□□□ 0.79
COMMD3-BMI1R4GMX3 AL353803.4-201ENST00000565882 1934 ntBASIC20.02■□□□□ 0.79
COMMD3-BMI1R4GMX3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 AC004448.1-201ENST00000458332 883 ntBASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.01■□□□□ 0.79
COMMD3-BMI1R4GMX3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 AL033527.3-201ENST00000566366 1196 ntBASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 FEM1AP1-201ENST00000431297 1995 ntBASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COMMD3-BMI1R4GMX3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COMMD3-BMI1R4GMX3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 AC103834.1-201ENST00000520383 144 ntBASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COMMD3-BMI1R4GMX3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COMMD3-BMI1R4GMX3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COMMD3-BMI1R4GMX3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
COMMD3-BMI1R4GMX3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 KRT8P33-201ENST00000508125 1423 ntBASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms