Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 AC010536.3-201ENST00000620306 533 ntBASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 AC133041.1-202ENST00000642053 222 ntBASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 AP004607.7-201ENST00000527152 1677 ntBASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHB12Q9Y5F1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 AC069152.1-201ENST00000438030 544 ntBASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 CNN2P6-201ENST00000439038 900 ntBASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 AC105036.2-201ENST00000569468 176 ntBASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 AC133552.2-202ENST00000575694 574 ntBASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB12Q9Y5F1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB12Q9Y5F1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB12Q9Y5F1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHB12Q9Y5F1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PCDHB12Q9Y5F1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB12Q9Y5F1 LINC01960-201ENST00000563759 1884 ntBASIC23.04■■□□□ 1.28
PCDHB12Q9Y5F1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB12Q9Y5F1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDHB12Q9Y5F1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 AC073210.2-201ENST00000430369 194 ntBASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 ANOS2P-203ENST00000472227 1816 ntBASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB12Q9Y5F1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 FAM201B-201ENST00000458407 597 ntBASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 AC066615.1-201ENST00000640911 628 ntBASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB12Q9Y5F1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 AL034346.1-201ENST00000568244 1277 ntBASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 AC013268.1-206ENST00000638368 961 ntBASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 AC112229.1-201ENST00000639295 961 ntBASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDHB12Q9Y5F1 AC092068.2-201ENST00000590491 1708 ntBASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 OR7E47P-201ENST00000546390 1422 ntBASIC22.99■■□□□ 1.27
PCDHB12Q9Y5F1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms