Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 GUSBP5-202ENST00000510805 1989 ntBASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 AC080038.3-201ENST00000623346 1952 ntBASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.8■■□□□ 1.08
FNDC3AQ9Y2H6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3AQ9Y2H6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3AQ9Y2H6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3AQ9Y2H6 AC080038.1-201ENST00000611274 1154 ntBASIC21.79■■□□□ 1.08
FNDC3AQ9Y2H6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.79■■□□□ 1.08
FNDC3AQ9Y2H6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FNDC3AQ9Y2H6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
FNDC3AQ9Y2H6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 AC006015.1-201ENST00000429970 570 ntBASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 AC087239.1-201ENST00000622671 572 ntBASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FNDC3AQ9Y2H6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
FNDC3AQ9Y2H6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
FNDC3AQ9Y2H6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
FNDC3AQ9Y2H6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.77■■□□□ 1.07
FNDC3AQ9Y2H6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
FNDC3AQ9Y2H6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 ESRRAP2-201ENST00000418437 1549 ntBASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 EP400NL-214ENST00000641289 2402 ntBASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FNDC3AQ9Y2H6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 AC137767.1-201ENST00000602918 1920 ntBASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms