Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 GUSBP5-202ENST00000510805 1989 ntBASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 AP004607.4-201ENST00000530158 1459 ntBASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 ID1-201ENST00000376105 1233 ntBASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 AC080038.1-201ENST00000611274 1154 ntBASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.71■□□□□ 0.75
NPIPA1Q9UND3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NPIPA1Q9UND3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 AC006015.1-201ENST00000429970 570 ntBASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NPIPA1Q9UND3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 AC079834.2-201ENST00000609776 1949 ntBASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NPIPA1Q9UND3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 LINC01960-201ENST00000563759 1884 ntBASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 KRT19P1-201ENST00000405746 1186 ntBASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 AC127496.7-201ENST00000625110 1798 ntBASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NPIPA1Q9UND3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPIPA1Q9UND3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms