Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBQLN2Q9UHD9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UBQLN2Q9UHD9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN2Q9UHD9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN2Q9UHD9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN2Q9UHD9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 MIR6765-201ENST00000614092 87 ntBASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 Z98882.1-201ENST00000622160 2253 ntBASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBQLN2Q9UHD9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UBQLN2Q9UHD9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 BHLHE23-202ENST00000612929 1109 ntBASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
UBQLN2Q9UHD9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN2Q9UHD9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBQLN2Q9UHD9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.96■□□□□ 0.46
UBQLN2Q9UHD9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 AC087742.1-201ENST00000575880 1738 ntBASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 AC026471.1-201ENST00000564629 3026 ntBASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
UBQLN2Q9UHD9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 ALDH1A3-203ENST00000557963 1670 ntBASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN2Q9UHD9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms