Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF2Q9P2I0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CPSF2Q9P2I0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF2Q9P2I0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CPSF2Q9P2I0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 AL035685.1-201ENST00000636663 812 ntBASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF2Q9P2I0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 AC241377.3-202ENST00000626088 1088 ntBASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 AC241585.3-202ENST00000628937 1088 ntBASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 AC245100.8-202ENST00000629247 1058 ntBASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CPSF2Q9P2I0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.39■■□□□ 1.02
CPSF2Q9P2I0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CPSF2Q9P2I0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.39■■□□□ 1.02
CPSF2Q9P2I0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CPSF2Q9P2I0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.39■■□□□ 1.02
CPSF2Q9P2I0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.39■■□□□ 1.02
CPSF2Q9P2I0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPSF2Q9P2I0 AC005229.4-201ENST00000610085 2198 ntBASIC21.39■■□□□ 1.01
CPSF2Q9P2I0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPSF2Q9P2I0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPSF2Q9P2I0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPSF2Q9P2I0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms