Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42SE2Q9NRR3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 AC006455.2-201ENST00000429931 906 ntBASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 RARRES2P1-201ENST00000474487 481 ntBASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 UNC93B8-201ENST00000511903 705 ntBASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 AC087239.1-201ENST00000622671 572 ntBASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC42SE2Q9NRR3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.71□□□□□ -0.06
CDC42SE2Q9NRR3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42SE2Q9NRR3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.71□□□□□ -0.06
CDC42SE2Q9NRR3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42SE2Q9NRR3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42SE2Q9NRR3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42SE2Q9NRR3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDC42SE2Q9NRR3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 AC099791.2-201ENST00000605725 427 ntBASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 SLC25A24-204ENST00000569674 2357 ntBASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDC42SE2Q9NRR3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.69□□□□□ -0.06
CDC42SE2Q9NRR3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 OR2I1P-207ENST00000453522 948 ntBASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.68□□□□□ -0.06
CDC42SE2Q9NRR3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms