Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NEUROD4Q9HD90 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NEUROD4Q9HD90 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NEUROD4Q9HD90 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEUROD4Q9HD90 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NEUROD4Q9HD90 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 BX842568.3-201ENST00000418104 571 ntBASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NEUROD4Q9HD90 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 MIR4767-201ENST00000582827 78 ntBASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 AC026310.3-201ENST00000625186 2373 ntBASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NEUROD4Q9HD90 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEUROD4Q9HD90 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.14■□□□□ 0.82
NEUROD4Q9HD90 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEUROD4Q9HD90 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 UNC93B3-201ENST00000308076 687 ntBASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 AC026471.6-201ENST00000622954 1905 ntBASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEUROD4Q9HD90 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 AC135279.3-201ENST00000610945 1311 ntBASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 Z98882.1-201ENST00000622160 2253 ntBASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 AP004607.7-201ENST00000527152 1677 ntBASIC20.12■□□□□ 0.81
NEUROD4Q9HD90 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms