Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.46■■□□□ 1.03
MRM3Q9HC36 AC027682.1-201ENST00000562846 899 ntBASIC21.46■■□□□ 1.03
MRM3Q9HC36 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.46■■□□□ 1.03
MRM3Q9HC36 Z98882.1-201ENST00000622160 2253 ntBASIC21.46■■□□□ 1.03
MRM3Q9HC36 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MRM3Q9HC36 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
MRM3Q9HC36 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.45■■□□□ 1.03
MRM3Q9HC36 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MRM3Q9HC36 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MRM3Q9HC36 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 EDA-201ENST00000338901 1233 ntBASIC21.45■■□□□ 1.02
MRM3Q9HC36 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MRM3Q9HC36 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.45■■□□□ 1.02
MRM3Q9HC36 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MRM3Q9HC36 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MRM3Q9HC36 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MRM3Q9HC36 AP006587.3-201ENST00000525742 1516 ntBASIC21.45■■□□□ 1.02
MRM3Q9HC36 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MRM3Q9HC36 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MRM3Q9HC36 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
MRM3Q9HC36 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.44■■□□□ 1.02
MRM3Q9HC36 AC008764.7-201ENST00000593779 1081 ntBASIC21.44■■□□□ 1.02
MRM3Q9HC36 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.44■■□□□ 1.02
MRM3Q9HC36 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MRM3Q9HC36 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MRM3Q9HC36 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
MRM3Q9HC36 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MRM3Q9HC36 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.44■■□□□ 1.02
MRM3Q9HC36 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MRM3Q9HC36 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MRM3Q9HC36 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRM3Q9HC36 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
MRM3Q9HC36 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MRM3Q9HC36 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.43■■□□□ 1.02
MRM3Q9HC36 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRM3Q9HC36 AC099791.1-201ENST00000416440 715 ntBASIC21.43■■□□□ 1.02
MRM3Q9HC36 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.43■■□□□ 1.02
MRM3Q9HC36 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.43■■□□□ 1.02
MRM3Q9HC36 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MRM3Q9HC36 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.43■■□□□ 1.02
MRM3Q9HC36 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.43■■□□□ 1.02
MRM3Q9HC36 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRM3Q9HC36 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
MRM3Q9HC36 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
MRM3Q9HC36 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MRM3Q9HC36 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MRM3Q9HC36 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MRM3Q9HC36 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.42■■□□□ 1.02
MRM3Q9HC36 AP001330.3-201ENST00000520123 633 ntBASIC21.42■■□□□ 1.02
MRM3Q9HC36 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.42■■□□□ 1.02
MRM3Q9HC36 AC003102.1-202ENST00000563394 1796 ntBASIC21.42■■□□□ 1.02
MRM3Q9HC36 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MRM3Q9HC36 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 AL355001.2-201ENST00000620617 1191 ntBASIC21.41■■□□□ 1.02
MRM3Q9HC36 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.41■■□□□ 1.02
MRM3Q9HC36 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MRM3Q9HC36 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
MRM3Q9HC36 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MRM3Q9HC36 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MRM3Q9HC36 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.4■■□□□ 1.02
MRM3Q9HC36 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.4■■□□□ 1.02
MRM3Q9HC36 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
MRM3Q9HC36 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.4■■□□□ 1.02
MRM3Q9HC36 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MRM3Q9HC36 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.39■■□□□ 1.02
MRM3Q9HC36 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.39■■□□□ 1.02
MRM3Q9HC36 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
MRM3Q9HC36 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MRM3Q9HC36 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.39■■□□□ 1.02
MRM3Q9HC36 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
MRM3Q9HC36 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
MRM3Q9HC36 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.39■■□□□ 1.01
MRM3Q9HC36 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MRM3Q9HC36 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.39■■□□□ 1.01
MRM3Q9HC36 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.39■■□□□ 1.01
MRM3Q9HC36 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.39■■□□□ 1.01
MRM3Q9HC36 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.39■■□□□ 1.01
MRM3Q9HC36 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
MRM3Q9HC36 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MRM3Q9HC36 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms