Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.98■■□□□ 1.11
VIPAS39Q9H9C1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
VIPAS39Q9H9C1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VIPAS39Q9H9C1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VIPAS39Q9H9C1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
VIPAS39Q9H9C1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 AL020996.1-203ENST00000536896 2307 ntBASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VIPAS39Q9H9C1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VIPAS39Q9H9C1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 AC004687.1-201ENST00000579003 1625 ntBASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VIPAS39Q9H9C1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VIPAS39Q9H9C1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VIPAS39Q9H9C1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VIPAS39Q9H9C1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VIPAS39Q9H9C1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.91■■□□□ 1.1
VIPAS39Q9H9C1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VIPAS39Q9H9C1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms