Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNDIG1Q9H7V2 AC009237.3-201ENST00000393279 1427 ntBASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNDIG1Q9H7V2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.86■□□□□ 0.93
SYNDIG1Q9H7V2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNDIG1Q9H7V2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 LINC01960-201ENST00000563759 1884 ntBASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 MFSD11-216ENST00000590393 1141 ntBASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNDIG1Q9H7V2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 UBE2DNL-204ENST00000602536 740 ntBASIC20.83■□□□□ 0.93
SYNDIG1Q9H7V2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNDIG1Q9H7V2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 GPX1P1-201ENST00000388829 606 ntBASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNDIG1Q9H7V2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms