Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RANBP3Q9H6Z4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RANBP3Q9H6Z4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 AC244015.2-201ENST00000616358 1861 ntBASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RANBP3Q9H6Z4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.49■□□□□ 0.55
RANBP3Q9H6Z4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 MIR3621-201ENST00000580529 85 ntBASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 AL356740.2-201ENST00000601559 647 ntBASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 AL117332.1-201ENST00000622628 974 ntBASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RANBP3Q9H6Z4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RANBP3Q9H6Z4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RANBP3Q9H6Z4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
RANBP3Q9H6Z4 LINC01006-201ENST00000333319 2292 ntBASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms