Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 AC053503.5-201ENST00000601508 636 ntBASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.87■■□□□ 1.09
RETREG1Q9H6L5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 C11orf96-202ENST00000528572 1834 ntBASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 EEF1DP3-203ENST00000566025 782 ntBASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.86■■□□□ 1.09
RETREG1Q9H6L5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RETREG1Q9H6L5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 AC104564.3-201ENST00000582367 638 ntBASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RETREG1Q9H6L5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 AP004607.4-201ENST00000530158 1459 ntBASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 KRT19P1-201ENST00000405746 1186 ntBASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 NTF6G-201ENST00000591094 616 ntBASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 AC003102.1-202ENST00000563394 1796 ntBASIC21.83■■□□□ 1.09
RETREG1Q9H6L5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
RETREG1Q9H6L5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
RETREG1Q9H6L5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RETREG1Q9H6L5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RETREG1Q9H6L5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.83■■□□□ 1.08
RETREG1Q9H6L5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RETREG1Q9H6L5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 AC138907.5-202ENST00000569484 235 ntBASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG1Q9H6L5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms