Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC68Q9H2F9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC68Q9H2F9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CCDC68Q9H2F9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 AC096631.2-201ENST00000436136 790 ntBASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC68Q9H2F9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 AC233992.3-201ENST00000607491 485 ntBASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC68Q9H2F9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 AC126544.1-201ENST00000580842 1059 ntBASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC68Q9H2F9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 PBX2P1-201ENST00000493219 1291 ntBASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 AL034346.1-201ENST00000568244 1277 ntBASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CCDC68Q9H2F9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 AC010542.4-201ENST00000563151 1910 ntBASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC68Q9H2F9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC68Q9H2F9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms