Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 AC026310.3-201ENST00000625186 2373 ntBASIC23.84■■□□□ 1.41
TRIM9Q9C026 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM9Q9C026 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM9Q9C026 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM9Q9C026 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM9Q9C026 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM9Q9C026 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM9Q9C026 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM9Q9C026 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM9Q9C026 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM9Q9C026 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM9Q9C026 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM9Q9C026 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM9Q9C026 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM9Q9C026 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM9Q9C026 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM9Q9C026 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM9Q9C026 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TRIM9Q9C026 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM9Q9C026 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM9Q9C026 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TRIM9Q9C026 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM9Q9C026 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
TRIM9Q9C026 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM9Q9C026 AP006587.3-201ENST00000525742 1516 ntBASIC23.82■■□□□ 1.4
TRIM9Q9C026 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 AC003102.1-202ENST00000563394 1796 ntBASIC23.82■■□□□ 1.4
TRIM9Q9C026 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM9Q9C026 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRIM9Q9C026 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM9Q9C026 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM9Q9C026 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
TRIM9Q9C026 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM9Q9C026 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM9Q9C026 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.81■■□□□ 1.4
TRIM9Q9C026 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.81■■□□□ 1.4
TRIM9Q9C026 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM9Q9C026 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM9Q9C026 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM9Q9C026 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM9Q9C026 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM9Q9C026 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM9Q9C026 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM9Q9C026 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM9Q9C026 MIR572-201ENST00000384983 95 ntBASIC23.8■■□□□ 1.4
TRIM9Q9C026 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TRIM9Q9C026 AC105233.4-201ENST00000642045 216 ntBASIC23.8■■□□□ 1.4
TRIM9Q9C026 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM9Q9C026 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM9Q9C026 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM9Q9C026 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM9Q9C026 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM9Q9C026 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TRIM9Q9C026 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM9Q9C026 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM9Q9C026 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM9Q9C026 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM9Q9C026 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.79■■□□□ 1.4
TRIM9Q9C026 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM9Q9C026 AC019069.1-201ENST00000610008 1333 ntBASIC23.79■■□□□ 1.4
TRIM9Q9C026 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM9Q9C026 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM9Q9C026 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM9Q9C026 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM9Q9C026 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM9Q9C026 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM9Q9C026 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.78■■□□□ 1.4
TRIM9Q9C026 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
TRIM9Q9C026 AC104564.3-201ENST00000582367 638 ntBASIC23.78■■□□□ 1.4
TRIM9Q9C026 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM9Q9C026 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM9Q9C026 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM9Q9C026 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM9Q9C026 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM9Q9C026 Z98882.1-201ENST00000622160 2253 ntBASIC23.77■■□□□ 1.4
TRIM9Q9C026 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM9Q9C026 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM9Q9C026 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TRIM9Q9C026 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM9Q9C026 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM9Q9C026 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM9Q9C026 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM9Q9C026 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM9Q9C026 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM9Q9C026 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM9Q9C026 AC142381.2-201ENST00000566120 298 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms