Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 AL031602.1-201ENST00000633169 911 ntBASIC18.32■□□□□ 0.52
NICN1Q9BSH3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.32■□□□□ 0.52
NICN1Q9BSH3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NICN1Q9BSH3 AC073130.3-201ENST00000624389 2278 ntBASIC18.32■□□□□ 0.52
NICN1Q9BSH3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.31■□□□□ 0.52
NICN1Q9BSH3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 AC079089.2-201ENST00000531211 1277 ntBASIC18.3■□□□□ 0.52
NICN1Q9BSH3 AL451085.2-201ENST00000605085 799 ntBASIC18.3■□□□□ 0.52
NICN1Q9BSH3 AL117332.1-201ENST00000622628 974 ntBASIC18.3■□□□□ 0.52
NICN1Q9BSH3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.3■□□□□ 0.52
NICN1Q9BSH3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 AC006455.2-201ENST00000429931 906 ntBASIC18.29■□□□□ 0.52
NICN1Q9BSH3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NICN1Q9BSH3 AC133637.1-201ENST00000624115 1537 ntBASIC18.28■□□□□ 0.52
NICN1Q9BSH3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 RARRES2P1-201ENST00000474487 481 ntBASIC18.28■□□□□ 0.52
NICN1Q9BSH3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 AL157384.1-201ENST00000445995 2473 ntBASIC18.28■□□□□ 0.52
NICN1Q9BSH3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.28■□□□□ 0.52
NICN1Q9BSH3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.27■□□□□ 0.52
NICN1Q9BSH3 AC009299.2-201ENST00000482477 511 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms