Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC145676.1-201ENST00000514988 2004 ntBASIC18.08■□□□□ 0.49
FOXC2Q99958 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
FOXC2Q99958 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FOXC2Q99958 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXC2Q99958 AC091874.3-201ENST00000512672 1195 ntBASIC18.08■□□□□ 0.48
FOXC2Q99958 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.08■□□□□ 0.48
FOXC2Q99958 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.08■□□□□ 0.48
FOXC2Q99958 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXC2Q99958 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 MIR718-201ENST00000390190 70 ntBASIC18.07■□□□□ 0.48
FOXC2Q99958 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.07■□□□□ 0.48
FOXC2Q99958 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.07■□□□□ 0.48
FOXC2Q99958 MIR1224-201ENST00000408193 85 ntBASIC18.07■□□□□ 0.48
FOXC2Q99958 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
FOXC2Q99958 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
FOXC2Q99958 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXC2Q99958 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXC2Q99958 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXC2Q99958 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXC2Q99958 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.07■□□□□ 0.48
FOXC2Q99958 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXC2Q99958 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXC2Q99958 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXC2Q99958 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXC2Q99958 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXC2Q99958 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXC2Q99958 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXC2Q99958 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXC2Q99958 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXC2Q99958 AC079630.1-202ENST00000618127 1840 ntBASIC18.05■□□□□ 0.48
FOXC2Q99958 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
FOXC2Q99958 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXC2Q99958 FAM210CP-201ENST00000445714 574 ntBASIC18.05■□□□□ 0.48
FOXC2Q99958 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
FOXC2Q99958 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXC2Q99958 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXC2Q99958 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXC2Q99958 AC073912.3-201ENST00000624414 853 ntBASIC18.05■□□□□ 0.48
FOXC2Q99958 AC073648.6-201ENST00000641589 218 ntBASIC18.05■□□□□ 0.48
FOXC2Q99958 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXC2Q99958 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXC2Q99958 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXC2Q99958 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXC2Q99958 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXC2Q99958 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
FOXC2Q99958 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXC2Q99958 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXC2Q99958 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
FOXC2Q99958 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
FOXC2Q99958 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXC2Q99958 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXC2Q99958 UNC93B5-201ENST00000530315 699 ntBASIC18.04■□□□□ 0.48
FOXC2Q99958 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXC2Q99958 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXC2Q99958 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXC2Q99958 AC093323.1-202ENST00000635031 2045 ntBASIC18.03■□□□□ 0.48
FOXC2Q99958 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXC2Q99958 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXC2Q99958 AP003097.1-201ENST00000530657 1135 ntBASIC18.03■□□□□ 0.48
FOXC2Q99958 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXC2Q99958 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.03■□□□□ 0.48
FOXC2Q99958 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXC2Q99958 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXC2Q99958 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXC2Q99958 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXC2Q99958 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXC2Q99958 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXC2Q99958 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXC2Q99958 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXC2Q99958 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXC2Q99958 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXC2Q99958 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXC2Q99958 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXC2Q99958 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms