Protein–RNA interactions for Protein: Q99816

TSG101, Tumor susceptibility gene 101 protein, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101Q99816 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
TSG101Q99816 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 AP004607.7-201ENST00000527152 1677 ntBASIC23.61■■□□□ 1.37
TSG101Q99816 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.61■■□□□ 1.37
TSG101Q99816 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TSG101Q99816 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TSG101Q99816 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TSG101Q99816 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.61■■□□□ 1.37
TSG101Q99816 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.6■■□□□ 1.37
TSG101Q99816 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.6■■□□□ 1.37
TSG101Q99816 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.6■■□□□ 1.37
TSG101Q99816 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.6■■□□□ 1.37
TSG101Q99816 AC126544.1-201ENST00000580842 1059 ntBASIC23.6■■□□□ 1.37
TSG101Q99816 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 AC026471.6-201ENST00000622954 1905 ntBASIC23.6■■□□□ 1.37
TSG101Q99816 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TSG101Q99816 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.59■■□□□ 1.37
TSG101Q99816 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TSG101Q99816 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSG101Q99816 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TSG101Q99816 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.59■■□□□ 1.37
TSG101Q99816 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TSG101Q99816 AC096631.2-201ENST00000436136 790 ntBASIC23.59■■□□□ 1.37
TSG101Q99816 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.59■■□□□ 1.37
TSG101Q99816 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TSG101Q99816 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.59■■□□□ 1.37
TSG101Q99816 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
TSG101Q99816 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSG101Q99816 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TSG101Q99816 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TSG101Q99816 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TSG101Q99816 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TSG101Q99816 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TSG101Q99816 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.58■■□□□ 1.37
TSG101Q99816 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
TSG101Q99816 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TSG101Q99816 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TSG101Q99816 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.58■■□□□ 1.37
TSG101Q99816 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TSG101Q99816 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.58■■□□□ 1.37
TSG101Q99816 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.58■■□□□ 1.37
TSG101Q99816 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.58■■□□□ 1.37
TSG101Q99816 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.58■■□□□ 1.37
TSG101Q99816 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TSG101Q99816 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.58■■□□□ 1.36
TSG101Q99816 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.57■■□□□ 1.36
TSG101Q99816 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.57■■□□□ 1.36
TSG101Q99816 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.57■■□□□ 1.36
TSG101Q99816 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.57■■□□□ 1.36
TSG101Q99816 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TSG101Q99816 PBX2P1-201ENST00000493219 1291 ntBASIC23.57■■□□□ 1.36
TSG101Q99816 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TSG101Q99816 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.57■■□□□ 1.36
TSG101Q99816 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
TSG101Q99816 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSG101Q99816 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
TSG101Q99816 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.56■■□□□ 1.36
TSG101Q99816 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSG101Q99816 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.56■■□□□ 1.36
TSG101Q99816 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TSG101Q99816 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSG101Q99816 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSG101Q99816 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.56■■□□□ 1.36
TSG101Q99816 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.56■■□□□ 1.36
TSG101Q99816 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TSG101Q99816 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TSG101Q99816 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.56■■□□□ 1.36
TSG101Q99816 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.55■■□□□ 1.36
TSG101Q99816 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TSG101Q99816 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.55■■□□□ 1.36
TSG101Q99816 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TSG101Q99816 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.55■■□□□ 1.36
TSG101Q99816 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSG101Q99816 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSG101Q99816 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.55■■□□□ 1.36
TSG101Q99816 AC008764.7-201ENST00000593779 1081 ntBASIC23.55■■□□□ 1.36
TSG101Q99816 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.55■■□□□ 1.36
TSG101Q99816 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.55■■□□□ 1.36
TSG101Q99816 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.55■■□□□ 1.36
TSG101Q99816 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TSG101Q99816 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms