Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AC010542.4-201ENST00000563151 1910 ntBASIC17.62■□□□□ 0.41
S1PR3Q99500 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
S1PR3Q99500 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
S1PR3Q99500 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
S1PR3Q99500 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
S1PR3Q99500 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
S1PR3Q99500 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.61■□□□□ 0.41
S1PR3Q99500 AC024257.2-201ENST00000549699 147 ntBASIC17.61■□□□□ 0.41
S1PR3Q99500 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.61■□□□□ 0.41
S1PR3Q99500 AC010525.1-201ENST00000585559 441 ntBASIC17.61■□□□□ 0.41
S1PR3Q99500 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.61■□□□□ 0.41
S1PR3Q99500 AC135279.3-201ENST00000610945 1311 ntBASIC17.61■□□□□ 0.41
S1PR3Q99500 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.61■□□□□ 0.41
S1PR3Q99500 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.61■□□□□ 0.41
S1PR3Q99500 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
S1PR3Q99500 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
S1PR3Q99500 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.6■□□□□ 0.41
S1PR3Q99500 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
S1PR3Q99500 PBX2P1-201ENST00000493219 1291 ntBASIC17.6■□□□□ 0.41
S1PR3Q99500 AP005435.1-201ENST00000529293 1178 ntBASIC17.6■□□□□ 0.41
S1PR3Q99500 AC110285.6-201ENST00000617652 491 ntBASIC17.6■□□□□ 0.41
S1PR3Q99500 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
S1PR3Q99500 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
S1PR3Q99500 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.6■□□□□ 0.41
S1PR3Q99500 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
S1PR3Q99500 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
S1PR3Q99500 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
S1PR3Q99500 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
S1PR3Q99500 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.59■□□□□ 0.41
S1PR3Q99500 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.59■□□□□ 0.41
S1PR3Q99500 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 FAM99A-202ENST00000538190 1989 ntBASIC17.59■□□□□ 0.41
S1PR3Q99500 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
S1PR3Q99500 OXCT2P1-201ENST00000447263 1535 ntBASIC17.59■□□□□ 0.41
S1PR3Q99500 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.59■□□□□ 0.41
S1PR3Q99500 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.59■□□□□ 0.41
S1PR3Q99500 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.59■□□□□ 0.41
S1PR3Q99500 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.59■□□□□ 0.41
S1PR3Q99500 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
S1PR3Q99500 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.59■□□□□ 0.41
S1PR3Q99500 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.59■□□□□ 0.41
S1PR3Q99500 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
S1PR3Q99500 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
S1PR3Q99500 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
S1PR3Q99500 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
S1PR3Q99500 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
S1PR3Q99500 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
S1PR3Q99500 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
S1PR3Q99500 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
S1PR3Q99500 MIR4767-201ENST00000582827 78 ntBASIC17.58■□□□□ 0.4
S1PR3Q99500 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.58■□□□□ 0.4
S1PR3Q99500 AL139246.5-201ENST00000606645 996 ntBASIC17.58■□□□□ 0.4
S1PR3Q99500 AC106739.1-201ENST00000617035 715 ntBASIC17.58■□□□□ 0.4
S1PR3Q99500 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.58■□□□□ 0.4
S1PR3Q99500 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.58■□□□□ 0.4
S1PR3Q99500 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
S1PR3Q99500 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
S1PR3Q99500 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.57■□□□□ 0.4
S1PR3Q99500 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
S1PR3Q99500 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
S1PR3Q99500 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
S1PR3Q99500 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
S1PR3Q99500 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.57■□□□□ 0.4
S1PR3Q99500 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 SLC47A1P1-202ENST00000449666 945 ntBASIC17.57■□□□□ 0.4
S1PR3Q99500 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
S1PR3Q99500 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.57■□□□□ 0.4
S1PR3Q99500 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
S1PR3Q99500 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms