Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP54Q96N23 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP54Q96N23 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP54Q96N23 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 ALDH1A3-203ENST00000557963 1670 ntBASIC21.23■□□□□ 0.99
CFAP54Q96N23 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP54Q96N23 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP54Q96N23 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP54Q96N23 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 CD177P1-201ENST00000606252 935 ntBASIC21.23■□□□□ 0.99
CFAP54Q96N23 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP54Q96N23 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP54Q96N23 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CFAP54Q96N23 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP54Q96N23 OR10C1-204ENST00000622521 1039 ntBASIC21.23■□□□□ 0.99
CFAP54Q96N23 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP54Q96N23 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CFAP54Q96N23 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CFAP54Q96N23 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.22■□□□□ 0.99
CFAP54Q96N23 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP54Q96N23 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CFAP54Q96N23 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP54Q96N23 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
CFAP54Q96N23 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP54Q96N23 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP54Q96N23 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP54Q96N23 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP54Q96N23 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP54Q96N23 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CFAP54Q96N23 AL512625.2-201ENST00000417533 625 ntBASIC21.2■□□□□ 0.99
CFAP54Q96N23 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.2■□□□□ 0.99
CFAP54Q96N23 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CFAP54Q96N23 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.2■□□□□ 0.98
CFAP54Q96N23 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP54Q96N23 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP54Q96N23 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.19■□□□□ 0.98
CFAP54Q96N23 AC008694.1-202ENST00000636953 945 ntBASIC21.19■□□□□ 0.98
CFAP54Q96N23 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.19■□□□□ 0.98
CFAP54Q96N23 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP54Q96N23 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP54Q96N23 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP54Q96N23 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CFAP54Q96N23 MIR6089-201ENST00000616698 64 ntBASIC21.19■□□□□ 0.98
CFAP54Q96N23 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CFAP54Q96N23 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.18■□□□□ 0.98
CFAP54Q96N23 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 AC004812.2-201ENST00000611079 2094 ntBASIC21.18■□□□□ 0.98
CFAP54Q96N23 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CFAP54Q96N23 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CFAP54Q96N23 AC012618.2-201ENST00000428058 849 ntBASIC21.18■□□□□ 0.98
CFAP54Q96N23 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.18■□□□□ 0.98
CFAP54Q96N23 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.18■□□□□ 0.98
CFAP54Q96N23 AC092865.7-201ENST00000641832 219 ntBASIC21.18■□□□□ 0.98
CFAP54Q96N23 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP54Q96N23 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.18■□□□□ 0.98
CFAP54Q96N23 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP54Q96N23 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP54Q96N23 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP54Q96N23 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP54Q96N23 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.17■□□□□ 0.98
CFAP54Q96N23 AC144652.1-201ENST00000609974 1624 ntBASIC21.17■□□□□ 0.98
CFAP54Q96N23 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CFAP54Q96N23 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms