Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TIMD4Q96H15 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMD4Q96H15 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMD4Q96H15 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMD4Q96H15 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.96■□□□□ 0.47
TIMD4Q96H15 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMD4Q96H15 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMD4Q96H15 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.96■□□□□ 0.46
TIMD4Q96H15 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.96■□□□□ 0.46
TIMD4Q96H15 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 AC055733.4-201ENST00000638462 1354 ntBASIC17.95■□□□□ 0.46
TIMD4Q96H15 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TIMD4Q96H15 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TIMD4Q96H15 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.94■□□□□ 0.46
TIMD4Q96H15 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TIMD4Q96H15 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.94■□□□□ 0.46
TIMD4Q96H15 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.94■□□□□ 0.46
TIMD4Q96H15 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TIMD4Q96H15 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TIMD4Q96H15 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 AC139530.1-201ENST00000575312 1977 ntBASIC17.93■□□□□ 0.46
TIMD4Q96H15 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
TIMD4Q96H15 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.93■□□□□ 0.46
TIMD4Q96H15 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.93■□□□□ 0.46
TIMD4Q96H15 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 AC104187.1-201ENST00000607510 612 ntBASIC17.93■□□□□ 0.46
TIMD4Q96H15 AC092437.1-201ENST00000624794 1048 ntBASIC17.93■□□□□ 0.46
TIMD4Q96H15 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.93■□□□□ 0.46
TIMD4Q96H15 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TIMD4Q96H15 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 BID-214ENST00000617586 542 ntTSL 5 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 RARRES2P11-201ENST00000635158 484 ntBASIC17.92■□□□□ 0.46
TIMD4Q96H15 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.92■□□□□ 0.46
TIMD4Q96H15 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 AP006587.3-201ENST00000525742 1516 ntBASIC17.92■□□□□ 0.46
TIMD4Q96H15 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TIMD4Q96H15 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.91■□□□□ 0.46
TIMD4Q96H15 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TIMD4Q96H15 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMD4Q96H15 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.91■□□□□ 0.46
TIMD4Q96H15 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMD4Q96H15 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.91■□□□□ 0.46
TIMD4Q96H15 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMD4Q96H15 AC006015.1-201ENST00000429970 570 ntBASIC17.91■□□□□ 0.46
TIMD4Q96H15 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.91■□□□□ 0.46
TIMD4Q96H15 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TIMD4Q96H15 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TIMD4Q96H15 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.91■□□□□ 0.46
TIMD4Q96H15 KRT18P61-201ENST00000585825 1298 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms