Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CDCA5Q96FF9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CDCA5Q96FF9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 LINC01124-201ENST00000409786 2117 ntBASIC25.34■■□□□ 1.65
CDCA5Q96FF9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 UNC93B4-201ENST00000505679 747 ntBASIC25.34■■□□□ 1.65
CDCA5Q96FF9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.34■■□□□ 1.65
CDCA5Q96FF9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.33■■□□□ 1.65
CDCA5Q96FF9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.33■■□□□ 1.64
CDCA5Q96FF9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
CDCA5Q96FF9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.33■■□□□ 1.64
CDCA5Q96FF9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDCA5Q96FF9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDCA5Q96FF9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 ABCB10P4-201ENST00000566803 2184 ntBASIC25.3■■□□□ 1.64
CDCA5Q96FF9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDCA5Q96FF9 AC010980.2-201ENST00000587099 1412 ntBASIC25.29■■□□□ 1.64
CDCA5Q96FF9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDCA5Q96FF9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDCA5Q96FF9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDCA5Q96FF9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDCA5Q96FF9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CDCA5Q96FF9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CDCA5Q96FF9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.29■■□□□ 1.64
CDCA5Q96FF9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms