Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXRED1Q96CU9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXRED1Q96CU9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXRED1Q96CU9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXRED1Q96CU9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 AL356740.2-201ENST00000601559 647 ntBASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXRED1Q96CU9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 OR7E47P-201ENST00000546390 1422 ntBASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 AC068587.7-201ENST00000641602 218 ntBASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXRED1Q96CU9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 AL117332.1-201ENST00000622628 974 ntBASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXRED1Q96CU9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FOXRED1Q96CU9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.52■□□□□ 0.55
FOXRED1Q96CU9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
FOXRED1Q96CU9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.52■□□□□ 0.55
FOXRED1Q96CU9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
FOXRED1Q96CU9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FOXRED1Q96CU9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXRED1Q96CU9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
FOXRED1Q96CU9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXRED1Q96CU9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 MIR3621-201ENST00000580529 85 ntBASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FOXRED1Q96CU9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms