Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TTC9Q92623 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TTC9Q92623 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.36■□□□□ 0.85
TTC9Q92623 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.36■□□□□ 0.85
TTC9Q92623 SLC29A4P1-201ENST00000398760 971 ntBASIC20.36■□□□□ 0.85
TTC9Q92623 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.36■□□□□ 0.85
TTC9Q92623 AC005181.1-201ENST00000604782 1256 ntBASIC20.36■□□□□ 0.85
TTC9Q92623 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.36■□□□□ 0.85
TTC9Q92623 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TTC9Q92623 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TTC9Q92623 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC9Q92623 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TTC9Q92623 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.35■□□□□ 0.85
TTC9Q92623 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TTC9Q92623 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC9Q92623 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC9Q92623 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
TTC9Q92623 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TTC9Q92623 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.35■□□□□ 0.85
TTC9Q92623 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC9Q92623 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TTC9Q92623 DUX4L16-201ENST00000555130 1264 ntBASIC20.35■□□□□ 0.85
TTC9Q92623 AC087239.1-201ENST00000622671 572 ntBASIC20.35■□□□□ 0.85
TTC9Q92623 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.35■□□□□ 0.85
TTC9Q92623 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TTC9Q92623 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TTC9Q92623 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TTC9Q92623 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TTC9Q92623 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.34■□□□□ 0.85
TTC9Q92623 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TTC9Q92623 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.34■□□□□ 0.85
TTC9Q92623 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.34■□□□□ 0.85
TTC9Q92623 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TTC9Q92623 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.34■□□□□ 0.85
TTC9Q92623 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.34■□□□□ 0.85
TTC9Q92623 ITM2C-210ENST00000620962 501 ntBASIC20.34■□□□□ 0.85
TTC9Q92623 AC133041.1-202ENST00000642053 222 ntBASIC20.34■□□□□ 0.85
TTC9Q92623 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
TTC9Q92623 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC9Q92623 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC9Q92623 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC9Q92623 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC9Q92623 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TTC9Q92623 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TTC9Q92623 DUSP8P5-201ENST00000422884 1815 ntBASIC20.33■□□□□ 0.85
TTC9Q92623 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC9Q92623 AC007322.1-201ENST00000426983 750 ntBASIC20.33■□□□□ 0.85
TTC9Q92623 POU5F1P3-201ENST00000428824 1078 ntBASIC20.33■□□□□ 0.85
TTC9Q92623 AC073210.2-201ENST00000430369 194 ntBASIC20.33■□□□□ 0.85
TTC9Q92623 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC9Q92623 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.33■□□□□ 0.85
TTC9Q92623 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC9Q92623 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.33■□□□□ 0.85
TTC9Q92623 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC9Q92623 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC9Q92623 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.33■□□□□ 0.84
TTC9Q92623 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC9Q92623 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC9Q92623 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC9Q92623 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.32■□□□□ 0.84
TTC9Q92623 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TTC9Q92623 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TTC9Q92623 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC9Q92623 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC9Q92623 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.32■□□□□ 0.84
TTC9Q92623 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.32■□□□□ 0.84
TTC9Q92623 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC9Q92623 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC9Q92623 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC9Q92623 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TTC9Q92623 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TTC9Q92623 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC9Q92623 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TTC9Q92623 AC079140.4-201ENST00000507448 529 ntBASIC20.32■□□□□ 0.84
TTC9Q92623 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.32■□□□□ 0.84
TTC9Q92623 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.32■□□□□ 0.84
TTC9Q92623 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC9Q92623 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TTC9Q92623 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC9Q92623 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TTC9Q92623 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms