Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S1Q92572 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.84■□□□□ 0.61
AP3S1Q92572 AC104564.3-201ENST00000582367 638 ntBASIC18.84■□□□□ 0.61
AP3S1Q92572 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
AP3S1Q92572 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S1Q92572 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.84■□□□□ 0.61
AP3S1Q92572 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AP3S1Q92572 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
AP3S1Q92572 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
AP3S1Q92572 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
AP3S1Q92572 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S1Q92572 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.83■□□□□ 0.61
AP3S1Q92572 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S1Q92572 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S1Q92572 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S1Q92572 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
AP3S1Q92572 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3S1Q92572 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
AP3S1Q92572 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S1Q92572 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S1Q92572 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S1Q92572 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S1Q92572 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S1Q92572 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.82■□□□□ 0.6
AP3S1Q92572 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.82■□□□□ 0.6
AP3S1Q92572 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.82■□□□□ 0.6
AP3S1Q92572 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.82■□□□□ 0.6
AP3S1Q92572 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.82■□□□□ 0.6
AP3S1Q92572 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.82■□□□□ 0.6
AP3S1Q92572 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
AP3S1Q92572 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.82■□□□□ 0.6
AP3S1Q92572 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S1Q92572 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
AP3S1Q92572 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
AP3S1Q92572 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.81■□□□□ 0.6
AP3S1Q92572 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.81■□□□□ 0.6
AP3S1Q92572 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3S1Q92572 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.81■□□□□ 0.6
AP3S1Q92572 SPCS2P3-201ENST00000500401 656 ntBASIC18.81■□□□□ 0.6
AP3S1Q92572 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3S1Q92572 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
AP3S1Q92572 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.81■□□□□ 0.6
AP3S1Q92572 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S1Q92572 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AP3S1Q92572 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3S1Q92572 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
AP3S1Q92572 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
AP3S1Q92572 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3S1Q92572 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
AP3S1Q92572 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.8■□□□□ 0.6
AP3S1Q92572 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3S1Q92572 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3S1Q92572 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S1Q92572 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.8■□□□□ 0.6
AP3S1Q92572 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP3S1Q92572 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3S1Q92572 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S1Q92572 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S1Q92572 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3S1Q92572 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3S1Q92572 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S1Q92572 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
AP3S1Q92572 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3S1Q92572 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
AP3S1Q92572 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3S1Q92572 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3S1Q92572 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3S1Q92572 AF131216.4-201ENST00000638924 1588 ntBASIC18.78■□□□□ 0.6
AP3S1Q92572 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.78■□□□□ 0.6
AP3S1Q92572 ABHD17AP4-201ENST00000411545 909 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms