Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SKA2Q8WVK7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 C11orf96-202ENST00000528572 1834 ntBASIC21.15■□□□□ 0.98
SKA2Q8WVK7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SKA2Q8WVK7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.14■□□□□ 0.98
SKA2Q8WVK7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SKA2Q8WVK7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SKA2Q8WVK7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SKA2Q8WVK7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SKA2Q8WVK7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.14■□□□□ 0.98
SKA2Q8WVK7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 AC105265.2-201ENST00000467189 838 ntBASIC21.14■□□□□ 0.97
SKA2Q8WVK7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 AC105233.4-201ENST00000642045 216 ntBASIC21.14■□□□□ 0.97
SKA2Q8WVK7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.14■□□□□ 0.97
SKA2Q8WVK7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.13■□□□□ 0.97
SKA2Q8WVK7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 AP004607.7-201ENST00000527152 1677 ntBASIC21.12■□□□□ 0.97
SKA2Q8WVK7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SKA2Q8WVK7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 LINC00565-201ENST00000562710 2331 ntBASIC21.11■□□□□ 0.97
SKA2Q8WVK7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SKA2Q8WVK7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms