Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
PRUNE2Q8WUY3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.7■■□□□ 1.23
PRUNE2Q8WUY3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
PRUNE2Q8WUY3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
PRUNE2Q8WUY3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.7■■□□□ 1.22
PRUNE2Q8WUY3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PRUNE2Q8WUY3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PRUNE2Q8WUY3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PRUNE2Q8WUY3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.7■■□□□ 1.22
PRUNE2Q8WUY3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PRUNE2Q8WUY3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.69■■□□□ 1.22
PRUNE2Q8WUY3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 POU5F1P4-201ENST00000413175 1085 ntBASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 AC022211.4-201ENST00000625094 2161 ntBASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PRUNE2Q8WUY3 AL161729.1-201ENST00000604104 1402 ntBASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 TSPY15P-201ENST00000457163 923 ntBASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.67■■□□□ 1.22
PRUNE2Q8WUY3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 AC055733.4-201ENST00000638462 1354 ntBASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PRUNE2Q8WUY3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 AC133561.5-201ENST00000635547 218 ntBASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 AC010141.3-201ENST00000456659 717 ntBASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 AC010980.2-201ENST00000587099 1412 ntBASIC22.65■■□□□ 1.22
PRUNE2Q8WUY3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
PRUNE2Q8WUY3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PRUNE2Q8WUY3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
PRUNE2Q8WUY3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PRUNE2Q8WUY3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.64■■□□□ 1.21
PRUNE2Q8WUY3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.64■■□□□ 1.21
PRUNE2Q8WUY3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.63■■□□□ 1.21
PRUNE2Q8WUY3 KRT18P20-201ENST00000548986 1279 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms