Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 DUX4L8-201ENST00000629013 1275 ntBASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUX4L3-201ENST00000630187 1275 ntBASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUX4L7-201ENST00000630678 1275 ntBASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUX4L5-201ENST00000630834 1275 ntBASIC22.47■■□□□ 1.19
RNF139Q8WU17 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF139Q8WU17 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 AC092053.2-201ENST00000640557 1818 ntBASIC22.46■■□□□ 1.19
RNF139Q8WU17 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF139Q8WU17 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF139Q8WU17 AC005224.4-201ENST00000583262 1652 ntBASIC22.46■■□□□ 1.19
RNF139Q8WU17 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RNF139Q8WU17 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RNF139Q8WU17 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RNF139Q8WU17 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF139Q8WU17 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.45■■□□□ 1.18
RNF139Q8WU17 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.44■■□□□ 1.18
RNF139Q8WU17 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF139Q8WU17 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 AL162430.1-201ENST00000480705 870 ntBASIC22.44■■□□□ 1.18
RNF139Q8WU17 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF139Q8WU17 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF139Q8WU17 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.44■■□□□ 1.18
RNF139Q8WU17 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF139Q8WU17 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF139Q8WU17 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF139Q8WU17 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF139Q8WU17 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF139Q8WU17 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF139Q8WU17 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF139Q8WU17 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF139Q8WU17 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF139Q8WU17 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
RNF139Q8WU17 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.42■■□□□ 1.18
RNF139Q8WU17 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF139Q8WU17 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RNF139Q8WU17 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms