Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SH3RF3Q8TEJ3 AC138907.5-202ENST00000569484 235 ntBASIC25.56■■□□□ 1.68
SH3RF3Q8TEJ3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SH3RF3Q8TEJ3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3RF3Q8TEJ3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.56■■□□□ 1.68
SH3RF3Q8TEJ3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
SH3RF3Q8TEJ3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SH3RF3Q8TEJ3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 DUX4L16-201ENST00000555130 1264 ntBASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 EEF1DP3-203ENST00000566025 782 ntBASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 MYCNOS-205ENST00000641950 531 ntBASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SH3RF3Q8TEJ3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3RF3Q8TEJ3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 MIR663A-201ENST00000385250 93 ntBASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 AC006970.2-201ENST00000450065 779 ntBASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SH3RF3Q8TEJ3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 AC080038.3-201ENST00000623346 1952 ntBASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3RF3Q8TEJ3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.5■■□□□ 1.67
SH3RF3Q8TEJ3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SH3RF3Q8TEJ3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SH3RF3Q8TEJ3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.49■■□□□ 1.67
SH3RF3Q8TEJ3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SH3RF3Q8TEJ3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.49■■□□□ 1.67
SH3RF3Q8TEJ3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SH3RF3Q8TEJ3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms