Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD6Q8TD26 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD6Q8TD26 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CHD6Q8TD26 KRT18P48-201ENST00000434763 852 ntBASIC19.72■□□□□ 0.75
CHD6Q8TD26 PNMA6B-201ENST00000538162 1200 ntBASIC19.72■□□□□ 0.75
CHD6Q8TD26 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.72■□□□□ 0.75
CHD6Q8TD26 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD6Q8TD26 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD6Q8TD26 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD6Q8TD26 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD6Q8TD26 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD6Q8TD26 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.71■□□□□ 0.75
CHD6Q8TD26 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD6Q8TD26 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD6Q8TD26 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD6Q8TD26 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CHD6Q8TD26 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD6Q8TD26 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
CHD6Q8TD26 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHD6Q8TD26 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.71■□□□□ 0.75
CHD6Q8TD26 AC023511.2-201ENST00000618803 211 ntBASIC19.71■□□□□ 0.75
CHD6Q8TD26 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD6Q8TD26 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD6Q8TD26 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
CHD6Q8TD26 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD6Q8TD26 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD6Q8TD26 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD6Q8TD26 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD6Q8TD26 KRT17P3-201ENST00000420566 1262 ntBASIC19.69■□□□□ 0.74
CHD6Q8TD26 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.69■□□□□ 0.74
CHD6Q8TD26 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD6Q8TD26 MIR6786-201ENST00000616843 113 ntBASIC19.69■□□□□ 0.74
CHD6Q8TD26 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD6Q8TD26 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD6Q8TD26 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD6Q8TD26 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD6Q8TD26 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD6Q8TD26 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CHD6Q8TD26 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD6Q8TD26 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD6Q8TD26 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 AC060766.5-201ENST00000590539 871 ntBASIC19.68■□□□□ 0.74
CHD6Q8TD26 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD6Q8TD26 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD6Q8TD26 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD6Q8TD26 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 AC006557.6-201ENST00000623071 864 ntBASIC19.68■□□□□ 0.74
CHD6Q8TD26 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHD6Q8TD26 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD6Q8TD26 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD6Q8TD26 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.67■□□□□ 0.74
CHD6Q8TD26 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CHD6Q8TD26 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHD6Q8TD26 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD6Q8TD26 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD6Q8TD26 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD6Q8TD26 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD6Q8TD26 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD6Q8TD26 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD6Q8TD26 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.66■□□□□ 0.74
CHD6Q8TD26 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.66■□□□□ 0.74
CHD6Q8TD26 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CHD6Q8TD26 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD6Q8TD26 AC091076.1-201ENST00000610741 619 ntBASIC19.66■□□□□ 0.74
CHD6Q8TD26 AC006538.3-201ENST00000612495 578 ntBASIC19.66■□□□□ 0.74
CHD6Q8TD26 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD6Q8TD26 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHD6Q8TD26 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.66■□□□□ 0.74
CHD6Q8TD26 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
CHD6Q8TD26 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD6Q8TD26 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD6Q8TD26 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD6Q8TD26 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD6Q8TD26 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD6Q8TD26 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.65■□□□□ 0.74
CHD6Q8TD26 ERN1-208ENST00000606895 2068 ntBASIC19.65■□□□□ 0.74
CHD6Q8TD26 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD6Q8TD26 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CHD6Q8TD26 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms