Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.07■■□□□ 1.28
BEST2Q8NFU1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
BEST2Q8NFU1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.07■■□□□ 1.28
BEST2Q8NFU1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BEST2Q8NFU1 AC092053.2-201ENST00000640557 1818 ntBASIC23.07■■□□□ 1.28
BEST2Q8NFU1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BEST2Q8NFU1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
BEST2Q8NFU1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.05■■□□□ 1.28
BEST2Q8NFU1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
BEST2Q8NFU1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
BEST2Q8NFU1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 AC233723.2-201ENST00000623798 2106 ntBASIC23.02■■□□□ 1.28
BEST2Q8NFU1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 AC090192.1-201ENST00000517740 490 ntBASIC23.02■■□□□ 1.28
BEST2Q8NFU1 AC137761.2-201ENST00000561729 223 ntBASIC23.02■■□□□ 1.28
BEST2Q8NFU1 AC145350.3-201ENST00000569033 163 ntBASIC23.02■■□□□ 1.28
BEST2Q8NFU1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.02■■□□□ 1.28
BEST2Q8NFU1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 AC104187.1-201ENST00000607510 612 ntBASIC23.01■■□□□ 1.27
BEST2Q8NFU1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BEST2Q8NFU1 AC242852.2-201ENST00000615738 1807 ntBASIC23.01■■□□□ 1.27
BEST2Q8NFU1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23■■□□□ 1.27
BEST2Q8NFU1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23■■□□□ 1.27
BEST2Q8NFU1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
BEST2Q8NFU1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
BEST2Q8NFU1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23■■□□□ 1.27
BEST2Q8NFU1 AC004911.1-201ENST00000416316 871 ntBASIC23■■□□□ 1.27
BEST2Q8NFU1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23■■□□□ 1.27
BEST2Q8NFU1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23■■□□□ 1.27
BEST2Q8NFU1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23■■□□□ 1.27
BEST2Q8NFU1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
BEST2Q8NFU1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23■■□□□ 1.27
BEST2Q8NFU1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST2Q8NFU1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST2Q8NFU1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
BEST2Q8NFU1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.99■■□□□ 1.27
BEST2Q8NFU1 AC016769.1-201ENST00000409132 1010 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms